Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_21100 | Not Available | Negative | 4949094 - 4949330 | 9272.39 |
| duf4248 domain-containing protein | DWZ36_21105 | Not Available | Positive | 4949453 - 4949620 | 6457.75 |
| atp-dependent helicase | DWZ36_21110 | Not Available | Negative | 4949994 - 4952306 | 87306.3 |
| dna helicase recq | DWZ36_21115 | Not Available | Negative | 4952381 - 4954198 | 69010.8 |
| arac family transcriptional regulator | DWZ36_21120 | Not Available | Positive | 4954530 - 4954997 | 18149.8 |
| dihydrofolate reductase | DWZ36_21125 | Not Available | Positive | 4955104 - 4957116 | 76516.0 |
| dna alkylation repair protein | DWZ36_21130 | Not Available | Positive | 4957125 - 4957793 | 25616.1 |
| transcriptional repressor | DWZ36_21135 | Not Available | Positive | 4957824 - 4958315 | 19166.0 |
| adenylosuccinate synthase | DWZ36_21140 | Not Available | Positive | 4958332 - 4959603 | 46838.8 |
| duf4373 domain-containing protein | DWZ36_21145 | Not Available | Positive | 4959894 - 4960697 | 30704.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

