Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_20940 | Not Available | Positive | 4914870 - 4915958 | 42551.6 |
| glycosyltransferase | DWZ36_20945 | Not Available | Positive | 4915969 - 4917069 | 41648.4 |
| putative colanic acid biosynthesis acetyltransferase | DWZ36_20950 | Not Available | Positive | 4917072 - 4917620 | 20704.2 |
| acyltransferase | DWZ36_20955 | Not Available | Positive | 4917672 - 4918604 | 36432.7 |
| glycosyltransferase family 2 protein | DWZ36_20960 | Not Available | Positive | 4918616 - 4919521 | 35756.9 |
| glycosyltransferase | DWZ36_20965 | Not Available | Positive | 4919550 - 4920368 | 30972.0 |
| gdp-mannose 4,6-dehydratase | DWZ36_20970 | Not Available | Positive | 4920451 - 4921530 | 40983.1 |
| gdp-l-fucose synthase | DWZ36_20975 | Not Available | Positive | 4921551 - 4922633 | 41052.2 |
| mannose-1-phosphate guanylyltransferase | DWZ36_20980 | Not Available | Positive | 4922648 - 4923691 | 39471.5 |
| hypothetical protein | DWZ36_20985 | Not Available | Positive | 4923695 - 4924123 | 16939.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

