Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-phosphate glucose phosphotransferase | DWZ36_20835 | Not Available | Positive | 4892840 - 4894315 | 57010.1 |
| hypothetical protein | DWZ36_20840 | Not Available | Negative | 4894331 - 4894522 | 6851.37 |
| polysaccharide pyruvyl transferase family protein | DWZ36_20845 | Not Available | Negative | 4894626 - 4895723 | 42266.1 |
| 4fe-4s dicluster domain-containing protein | DWZ36_20850 | Not Available | Negative | 4895729 - 4896919 | 45513.5 |
| glycosyltransferase | DWZ36_20855 | Not Available | Negative | 4896903 - 4897973 | 41185.7 |
| glycosyltransferase | DWZ36_20860 | Not Available | Negative | 4897970 - 4898908 | 36371.2 |
| oligosaccharide repeat unit polymerase | DWZ36_20865 | Not Available | Negative | 4898918 - 4900168 | 47638.9 |
| polysaccharide pyruvyl transferase family protein | DWZ36_20870 | Not Available | Negative | 4900231 - 4901340 | 43258.7 |
| 4fe-4s dicluster domain-containing protein | DWZ36_20875 | Not Available | Negative | 4901353 - 4902492 | 43195.3 |
| lipopolysaccharide biosynthesis protein | DWZ36_20880 | Not Available | Negative | 4902489 - 4904027 | 57665.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

