Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_20785 | Not Available | Positive | 4884152 - 4884355 | 7833.56 |
| is66 family transposase | DWZ36_20790 | Not Available | Positive | 4884434 - 4885408 | 37635.9 |
| glycosyltransferase | DWZ36_20795 | Not Available | Positive | 4885814 - 4887040 | 47354.9 |
| glycosyltransferase family 1 protein | DWZ36_20800 | Not Available | Positive | 4887145 - 4888275 | 43884.1 |
| hypothetical protein | DWZ36_20805 | Not Available | Positive | 4888318 - 4888539 | 8825.62 |
| hypothetical protein | DWZ36_20810 | Not Available | Positive | 4888567 - 4889376 | 31213.2 |
| glucose-1-phosphate thymidylyltransferase | DWZ36_20815 | Not Available | Positive | 4889398 - 4890303 | 33625.5 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DWZ36_20820 | Not Available | Positive | 4890307 - 4890879 | 21745.9 |
| dtdp-4-dehydrorhamnose reductase | DWZ36_20825 | Not Available | Positive | 4890879 - 4891739 | 32219.3 |
| dtdp-glucose 4,6-dehydratase | DWZ36_20830 | Not Available | Positive | 4891764 - 4892840 | 41512.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

