Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| para family protein | DWZ36_20730 | Not Available | Positive | 4869847 - 4870626 | 28471.4 |
| hypothetical protein | DWZ36_20735 | Not Available | Positive | 4870642 - 4870875 | 8726.58 |
| fimbrillin family protein | DWZ36_20740 | Not Available | Positive | 4870887 - 4872692 | 68095.6 |
| fic family protein | DWZ36_20745 | Not Available | Positive | 4873240 - 4874085 | 32992.6 |
| is66 family transposase | DWZ36_20750 | Not Available | Positive | 4874130 - 4874951 | 31983.2 |
| hypothetical protein | DWZ36_20755 | Not Available | Positive | 4875154 - 4875975 | 31479.4 |
| hypothetical protein | DWZ36_20760 | Not Available | Positive | 4875975 - 4876385 | 15741.9 |
| hypothetical protein | DWZ36_20765 | Not Available | Positive | 4876426 - 4877913 | 56278.9 |
| hypothetical protein | DWZ36_20770 | Not Available | Positive | 4877972 - 4878352 | 14324.3 |
| hypothetical protein | DWZ36_20780 | Not Available | Negative | 4879659 - 4883120 | 122044.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

