Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF31-3
Accession NumberQRQI00000000.1
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcription termination/antitermination factor nusg | DWZ36_00155 | Not Available | + | 24504 - 25046 | 20140.3 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 25085 - 25454 | Not Available |
| 50s ribosomal protein l11 | DWZ36_00160 | Not Available | + | 25107 - 25550 | 15797.5 |
| 50s ribosomal protein l1 | DWZ36_00165 | Not Available | + | 25566 - 26264 | 24935.6 |
| 50s ribosomal protein l10 | DWZ36_00170 | Not Available | + | 26280 - 26798 | 18678.8 |
| 50s ribosomal protein l7/l12 | DWZ36_00175 | Not Available | + | 26845 - 27219 | 12654.2 |
| dna-directed rna polymerase subunit beta | DWZ36_00180 | Not Available | + | 27322 - 31134 | 142493.0 |
| 16s ribosomal rna | Not Available | Not Available | + | 29233 - 30766 | Not Available |
| dna-directed rna polymerase subunit beta' | DWZ36_00185 | Not Available | + | 31173 - 35459 | 158848.0 |
| 23s ribosomal rna | Not Available | Not Available | + | 31190 - 34033 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
