Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DWZ36_20465 | Not Available | Negative | 4805831 - 4806136 | 11724.1 |
| dna-binding protein | DWZ36_20470 | Not Available | Negative | 4806168 - 4806467 | 11590.3 |
| hypothetical protein | DWZ36_20475 | Not Available | Negative | 4806473 - 4806670 | 7273.61 |
| duf4831 family protein | DWZ36_20485 | Not Available | Negative | 4806971 - 4808020 | 38658.6 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | DWZ36_20490 | Not Available | Negative | 4808057 - 4809592 | 56235.6 |
| hypoxanthine phosphoribosyltransferase | DWZ36_20495 | Not Available | Positive | 4809712 - 4810248 | 20092.5 |
| adenylate kinase | DWZ36_20500 | Not Available | Positive | 4810289 - 4810858 | 20885.2 |
| gtpase obge | DWZ36_20505 | Not Available | Positive | 4810974 - 4812158 | 44180.3 |
| peptidoglycan editing factor pgef | DWZ36_20510 | Not Available | Positive | 4812155 - 4812937 | 28811.3 |
| hypothetical protein | DWZ36_20515 | Not Available | Positive | 4812977 - 4813636 | 24450.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

