Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrillin family protein | DWZ36_20365 | Not Available | Negative | 4787438 - 4788433 | 37275.4 |
| aaa family atpase | DWZ36_20370 | Not Available | Negative | 4788731 - 4790341 | 62418.3 |
| hypothetical protein | DWZ36_20375 | Not Available | Positive | 4790389 - 4790610 | 8588.52 |
| hypothetical protein | DWZ36_20380 | Not Available | Negative | 4790607 - 4791722 | 42026.7 |
| hypothetical protein | DWZ36_20385 | Not Available | Negative | 4791811 - 4794939 | 117272.0 |
| helix-turn-helix domain-containing protein | DWZ36_20390 | Not Available | Negative | 4795042 - 4795282 | 8990.95 |
| hypothetical protein | DWZ36_20395 | Not Available | Positive | 4795546 - 4795755 | 7785.61 |
| hypothetical protein | DWZ36_20400 | Not Available | Positive | 4795891 - 4796313 | 16212.5 |
| mobilization protein | DWZ36_20405 | Not Available | Positive | 4796298 - 4797566 | 47405.4 |
| conjugal transfer protein trag | DWZ36_20410 | Not Available | Positive | 4797584 - 4799593 | 77041.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

