Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_20260 | Not Available | Negative | 4759363 - 4760628 | 48220.6 |
| is66 family transposase | DWZ36_20265 | Not Available | Negative | 4760816 - 4762588 | 68143.7 |
| hypothetical protein | DWZ36_20270 | Not Available | Negative | 4762658 - 4762993 | 13414.3 |
| hypothetical protein | DWZ36_20275 | Not Available | Negative | 4762987 - 4763337 | 13399.1 |
| glycosyltransferase family 2 protein | DWZ36_20280 | Not Available | Negative | 4763429 - 4764382 | 36227.6 |
| polysaccharide pyruvyl transferase yvff | DWZ36_20285 | Not Available | Negative | 4764391 - 4765326 | 36954.0 |
| capa family protein | DWZ36_20290 | Not Available | Negative | 4765329 - 4766486 | 44543.0 |
| hypothetical protein | DWZ36_20295 | Not Available | Negative | 4766483 - 4767742 | 48552.3 |
| lipopolysaccharide biosynthesis protein | DWZ36_20300 | Not Available | Negative | 4767744 - 4769270 | 57775.0 |
| glycoside hydrolase family 16 protein | DWZ36_20305 | Not Available | Positive | 4769633 - 4770424 | 30544.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

