Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| epsg family protein | DWZ36_20210 | Not Available | Negative | 4749510 - 4750619 | 44412.4 |
| acyltransferase | DWZ36_20215 | Not Available | Negative | 4751426 - 4752070 | 23870.3 |
| lipopolysaccharide biosynthesis protein | DWZ36_20220 | Not Available | Negative | 4752265 - 4753338 | 42065.7 |
| acyltransferase | DWZ36_20225 | Not Available | Negative | 4753360 - 4753950 | 21727.8 |
| lipopolysaccharide biosynthesis protein | DWZ36_20230 | Not Available | Negative | 4753970 - 4755499 | 57805.7 |
| hypothetical protein | DWZ36_20235 | Not Available | Negative | 4755522 - 4756106 | 22506.4 |
| hypothetical protein | DWZ36_20240 | Not Available | Negative | 4756291 - 4757160 | 34630.4 |
| hypothetical protein | DWZ36_20245 | Not Available | Negative | 4757138 - 4757815 | 26162.0 |
| glycosyltransferase | DWZ36_20250 | Not Available | Negative | 4757812 - 4758627 | 31709.3 |
| glycosyltransferase | DWZ36_20255 | Not Available | Negative | 4758639 - 4759355 | 27321.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

