Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 527721 - 527795 | Not Available |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | DWZ36_01960 | Not Available | Positive | 528206 - 530053 | 66247.6 |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | DWZ36_01965 | Not Available | Positive | 530077 - 531081 | 36538.8 |
| uracil phosphoribosyltransferase | DWZ36_01970 | Not Available | Negative | 531239 - 531898 | 24410.4 |
| phosphoenolpyruvate carboxykinase (atp) | DWZ36_01975 | Not Available | Positive | 532159 - 533766 | 59093.1 |
| proton-conducting membrane transporter | DWZ36_01980 | Not Available | Positive | 533872 - 534522 | 23949.2 |
| translational gtpase typa | DWZ36_01985 | Not Available | Negative | 534583 - 536385 | 67346.3 |
| hypothetical protein | DWZ36_01990 | Not Available | Positive | 536624 - 536875 | 10083.2 |
| 30s ribosomal protein s15 | DWZ36_01995 | Not Available | Positive | 537156 - 537425 | 10364.5 |
| s-ribosylhomocysteine lyase | DWZ36_02000 | Not Available | Negative | 537528 - 538013 | 18487.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

