Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exo-alpha-sialidase | DWZ36_20160 | Not Available | Negative | 4738714 - 4740345 | 61457.5 |
| glycosyltransferase | DWZ36_20165 | Not Available | Negative | 4740359 - 4741486 | 43109.8 |
| lipopolysaccharide biosynthesis protein | DWZ36_20170 | Not Available | Negative | 4741483 - 4742583 | 43505.0 |
| hypothetical protein | DWZ36_20175 | Not Available | Negative | 4742878 - 4743201 | 13031.8 |
| hypothetical protein | DWZ36_20180 | Not Available | Negative | 4743222 - 4744034 | 31120.5 |
| nad(p)-dependent oxidoreductase | DWZ36_20185 | Not Available | Negative | 4744040 - 4745056 | 37846.1 |
| glycosyltransferase family 4 protein | DWZ36_20190 | Not Available | Negative | 4745063 - 4746178 | 42801.3 |
| glycosyltransferase | DWZ36_20195 | Not Available | Negative | 4746306 - 4747370 | 40415.5 |
| glycosyltransferase | DWZ36_20200 | Not Available | Negative | 4747436 - 4748632 | 45735.6 |
| glycosyltransferase | DWZ36_20205 | Not Available | Negative | 4748633 - 4749499 | 33862.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

