Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DWZ36_19540 | Not Available | Positive | 4581710 - 4582990 | 47792.6 |
| abc transporter permease | DWZ36_19545 | Not Available | Positive | 4582994 - 4584265 | 48168.1 |
| tolc family protein | DWZ36_19550 | Not Available | Positive | 4584453 - 4585937 | 56980.8 |
| sigma-54-dependent fis family transcriptional regulator | DWZ36_19555 | Not Available | Positive | 4586023 - 4587378 | 50734.5 |
| pas domain-containing protein | DWZ36_19560 | Not Available | Positive | 4587401 - 4588696 | 49040.2 |
| hypothetical protein | DWZ36_19565 | Not Available | Negative | 4588947 - 4589159 | 8288.24 |
| hypothetical protein | DWZ36_19570 | Not Available | Positive | 4589179 - 4589769 | 21754.7 |
| duf2764 domain-containing protein | DWZ36_19575 | Not Available | Positive | 4589779 - 4590615 | 32594.0 |
| v-type atp synthase subunit a | DWZ36_19580 | Not Available | Positive | 4590634 - 4592388 | 65785.3 |
| v-type atp synthase subunit b | DWZ36_19585 | Not Available | Positive | 4592424 - 4593746 | 48182.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

