Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_19490 | Not Available | Positive | 4571404 - 4571766 | 13705.4 |
| hypothetical protein | DWZ36_19495 | Not Available | Positive | 4571788 - 4572336 | 21482.5 |
| hypothetical protein | DWZ36_19500 | Not Available | Positive | 4572492 - 4573133 | 24576.1 |
| lysm peptidoglycan-binding domain-containing protein | DWZ36_19505 | Not Available | Positive | 4573239 - 4574135 | 35105.5 |
| hlyd family efflux transporter periplasmic adaptor subunit | DWZ36_19510 | Not Available | Positive | 4574297 - 4575544 | 46534.9 |
| abc transporter permease | DWZ36_19515 | Not Available | Positive | 4575671 - 4576972 | 49433.1 |
| abc transporter permease | DWZ36_19520 | Not Available | Positive | 4576988 - 4578268 | 49292.9 |
| abc transporter atp-binding protein | DWZ36_19525 | Not Available | Positive | 4578387 - 4579052 | 24550.0 |
| abc transporter permease | DWZ36_19530 | Not Available | Positive | 4579096 - 4580388 | 47601.7 |
| abc transporter permease | DWZ36_19535 | Not Available | Positive | 4580420 - 4581670 | 48071.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

