Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spor domain-containing protein | DWZ36_19435 | Not Available | Positive | 4563152 - 4563610 | 17067.7 |
| gtp cyclohydrolase i fole | DWZ36_19440 | Not Available | Positive | 4563615 - 4564208 | 22693.7 |
| dna primase | DWZ36_19445 | Not Available | Negative | 4564221 - 4566296 | 78746.5 |
| malate dehydrogenase | DWZ36_19450 | Not Available | Negative | 4566374 - 4567375 | 36087.5 |
| transcriptional regulator | DWZ36_19455 | Not Available | Negative | 4567619 - 4567909 | 10732.2 |
| hypothetical protein | DWZ36_19460 | Not Available | Negative | 4567920 - 4568507 | 22318.1 |
| hypothetical protein | DWZ36_19465 | Not Available | Negative | 4568537 - 4568785 | 9849.92 |
| hypothetical protein | DWZ36_19470 | Not Available | Negative | 4569040 - 4569334 | 11175.6 |
| duf4476 domain-containing protein | DWZ36_19480 | Not Available | Negative | 4569881 - 4570552 | 25502.9 |
| rna polymerase sigma factor | DWZ36_19485 | Not Available | Positive | 4570860 - 4571396 | 21672.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

