Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease h | DWZ36_19270 | Not Available | Negative | 4523987 - 4524613 | 23847.5 |
| arginine--trna ligase | DWZ36_19275 | Not Available | Negative | 4524614 - 4526434 | 68001.7 |
| hypothetical protein | DWZ36_19285 | Not Available | Negative | 4529323 - 4530534 | 45862.6 |
| wg repeat-containing protein | DWZ36_19290 | Not Available | Negative | 4530553 - 4532400 | 68542.6 |
| hypothetical protein | DWZ36_19295 | Not Available | Negative | 4532412 - 4533347 | 34572.1 |
| hypothetical protein | DWZ36_19300 | Not Available | Negative | 4533355 - 4534305 | 35079.1 |
| hypothetical protein | DWZ36_19305 | Not Available | Negative | 4534318 - 4534803 | 18259.8 |
| hypothetical protein | DWZ36_19310 | Not Available | Negative | 4534954 - 4535448 | 18048.3 |
| dna-binding response regulator | DWZ36_19320 | Not Available | Negative | 4537433 - 4538197 | 29786.5 |
| tetratricopeptide repeat protein | DWZ36_19325 | Not Available | Negative | 4538325 - 4540376 | 79971.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

