Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_19215 | Not Available | Negative | 4509104 - 4510561 | 54556.7 |
| glycosyltransferase | DWZ36_19225 | Not Available | Negative | 4511274 - 4512206 | 35646.8 |
| abc transporter atp-binding protein | DWZ36_19230 | Not Available | Negative | 4512208 - 4514046 | 68820.3 |
| glycosyltransferase | DWZ36_19235 | Not Available | Negative | 4514104 - 4515420 | 50507.2 |
| glycosyltransferase family 2 protein | DWZ36_19240 | Not Available | Positive | 4515666 - 4516655 | 38603.6 |
| alkaline phosphatase family protein | DWZ36_19245 | Not Available | Positive | 4516834 - 4518861 | 77435.9 |
| glycosyltransferase | DWZ36_19250 | Not Available | Negative | 4518892 - 4519839 | 36580.4 |
| gtra family protein | DWZ36_19255 | Not Available | Negative | 4519876 - 4520250 | 14231.0 |
| glycosyltransferase family 39 protein | DWZ36_19260 | Not Available | Positive | 4520337 - 4522061 | 65330.9 |
| alkaline phosphatase family protein | DWZ36_19265 | Not Available | Negative | 4522145 - 4523971 | 68066.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

