Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphorylase | DWZ36_19160 | Not Available | Positive | 4494095 - 4494973 | 32767.5 |
| gaf domain-containing protein | DWZ36_19165 | Not Available | Positive | 4495183 - 4495668 | 18137.7 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DWZ36_19170 | Not Available | Positive | 4495679 - 4497175 | 55275.2 |
| hypothetical protein | DWZ36_19175 | Not Available | Negative | 4498288 - 4499124 | 34157.2 |
| duf4065 domain-containing protein | DWZ36_19180 | Not Available | Positive | 4499499 - 4500056 | 21346.9 |
| duf4065 domain-containing protein | DWZ36_19185 | Not Available | Negative | 4500304 - 4500894 | 22637.2 |
| atp-binding protein | DWZ36_19190 | Not Available | Positive | 4501083 - 4502252 | 44943.5 |
| phosphoesterase | DWZ36_19195 | Not Available | Negative | 4502726 - 4503211 | 19060.4 |
| hypothetical protein | DWZ36_19200 | Not Available | Positive | 4503662 - 4504378 | 27943.2 |
| tir domain-containing protein | DWZ36_19210 | Not Available | Negative | 4505814 - 4508804 | 117445.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

