Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_19110 | Not Available | Negative | 4481206 - 4482009 | 28728.8 |
| hypothetical protein | DWZ36_19115 | Not Available | Negative | 4482021 - 4484420 | 83853.0 |
| fimbrillin family protein | DWZ36_19120 | Not Available | Negative | 4484502 - 4485416 | 32606.6 |
| hypothetical protein | DWZ36_19125 | Not Available | Negative | 4485453 - 4486331 | 31891.7 |
| hypothetical protein | DWZ36_19130 | Not Available | Negative | 4486324 - 4488408 | 80682.1 |
| hypothetical protein | DWZ36_19135 | Not Available | Positive | 4489050 - 4489271 | 8511.09 |
| adenine nucleotide alpha hydrolase family protein | DWZ36_19140 | Not Available | Negative | 4489965 - 4490720 | 29155.8 |
| hypothetical protein | DWZ36_19145 | Not Available | Positive | 4490864 - 4492273 | 54177.8 |
| nodulation efficiency protein d (nfed) | DWZ36_19150 | Not Available | Positive | 4492287 - 4492757 | 17112.5 |
| upf0365 family protein | DWZ36_19155 | Not Available | Positive | 4492900 - 4493901 | 36124.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

