Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon protein tram | DWZ36_19055 | Not Available | Negative | 4472765 - 4473721 | 35304.6 |
| hypothetical protein | DWZ36_19060 | Not Available | Negative | 4473737 - 4474393 | 24723.7 |
| hypothetical protein | DWZ36_19065 | Not Available | Negative | 4474408 - 4475205 | 29865.8 |
| duf4141 domain-containing protein | DWZ36_19070 | Not Available | Negative | 4475210 - 4475755 | 20163.3 |
| duf4141 domain-containing protein | DWZ36_19075 | Not Available | Negative | 4475780 - 4476325 | 20182.6 |
| hypothetical protein | DWZ36_19080 | Not Available | Negative | 4476350 - 4476922 | 20870.7 |
| conjugal transfer protein | DWZ36_19085 | Not Available | Negative | 4476919 - 4479363 | 94169.9 |
| hypothetical protein | DWZ36_19090 | Not Available | Positive | 4479461 - 4480030 | 21614.3 |
| hypothetical protein | DWZ36_19100 | Not Available | Negative | 4480584 - 4480895 | 11862.8 |
| hypothetical protein | DWZ36_19105 | Not Available | Negative | 4480901 - 4481209 | 10903.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

