Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin-binding protein | DWZ36_19005 | Not Available | Positive | 4462420 - 4464222 | 66676.0 |
| na+/glucose cotransporter | DWZ36_19010 | Not Available | Positive | 4464256 - 4465827 | 57766.6 |
| methionine synthase | DWZ36_19015 | Not Available | Negative | 4466119 - 4466805 | 25264.1 |
| methylcobamide--com methyltransferase | DWZ36_19020 | Not Available | Negative | 4466798 - 4467808 | 36572.3 |
| hypothetical protein | DWZ36_19025 | Not Available | Negative | 4467927 - 4468526 | 21420.8 |
| hth domain-containing protein | DWZ36_19030 | Not Available | Negative | 4468600 - 4468830 | 9115.21 |
| m23 family peptidase | DWZ36_19035 | Not Available | Negative | 4468827 - 4469378 | 20640.0 |
| conjugative transposon protein tran | DWZ36_19040 | Not Available | Negative | 4469389 - 4470513 | 43023.2 |
| hypothetical protein | DWZ36_19045 | Not Available | Positive | 4470826 - 4471245 | 16252.7 |
| hypothetical protein | DWZ36_19050 | Not Available | Negative | 4471228 - 4472598 | 52681.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

