Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_18900 | Not Available | Positive | 4437834 - 4438316 | 18607.2 |
| hypothetical protein | DWZ36_18905 | Not Available | Positive | 4438378 - 4440186 | 69981.9 |
| winged helix-turn-helix transcriptional regulator | DWZ36_18910 | Not Available | Positive | 4440749 - 4441366 | 23781.7 |
| duf3871 family protein | DWZ36_18915 | Not Available | Positive | 4441734 - 4442750 | 38591.0 |
| hypothetical protein | DWZ36_18920 | Not Available | Positive | 4442804 - 4443076 | 10869.0 |
| hypothetical protein | DWZ36_18925 | Not Available | Positive | 4443242 - 4443475 | 9090.88 |
| hypothetical protein | DWZ36_18930 | Not Available | Positive | 4443493 - 4443759 | 10170.3 |
| hypothetical protein | DWZ36_18940 | Not Available | Positive | 4444512 - 4445927 | 56757.9 |
| penicillin-binding protein | DWZ36_18945 | Not Available | Positive | 4445938 - 4446807 | 31297.6 |
| transcriptional regulator | DWZ36_18950 | Not Available | Negative | 4447344 - 4448177 | 32315.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

