Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | DWZ36_18700 | Not Available | Negative | 4396335 - 4397621 | 47992.5 |
| molecular chaperone dnaj | DWZ36_18705 | Not Available | Negative | 4397716 - 4398891 | 42201.2 |
| nucleotide exchange factor grpe | DWZ36_18710 | Not Available | Negative | 4398911 - 4399531 | 23521.8 |
| abc-f family atpase | DWZ36_18715 | Not Available | Positive | 4399709 - 4401328 | 61289.0 |
| sgnh/gdsl hydrolase family protein | DWZ36_18720 | Not Available | Positive | 4401518 - 4403029 | 57342.3 |
| hypothetical protein | DWZ36_18725 | Not Available | Positive | 4403252 - 4403527 | 10967.0 |
| dna repair protein | DWZ36_18730 | Not Available | Positive | 4403636 - 4404076 | 16368.5 |
| site-specific integrase | DWZ36_18735 | Not Available | Positive | 4404227 - 4404814 | 22532.8 |
| hypothetical protein | DWZ36_18740 | Not Available | Positive | 4405609 - 4406289 | 26160.7 |
| hypothetical protein | DWZ36_18745 | Not Available | Positive | 4406305 - 4406697 | 15266.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

