Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | DWZ36_01805 | Not Available | Negative | 479850 - 480293 | 17322.7 |
| hydroxymyristoyl-acp dehydratase | DWZ36_01810 | Not Available | Negative | 480290 - 480727 | 16453.2 |
| methyltransferase domain-containing protein | DWZ36_01815 | Not Available | Negative | 480724 - 481794 | 40634.7 |
| acyltransferase | DWZ36_01820 | Not Available | Negative | 481808 - 482692 | 34477.0 |
| acyl carrier protein | DWZ36_01825 | Not Available | Negative | 482692 - 482943 | 9584.45 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | DWZ36_01830 | Not Available | Negative | 482965 - 484194 | 44224.5 |
| 3-oxoacyl-acp reductase fabg | DWZ36_01835 | Not Available | Negative | 484202 - 484930 | 26465.9 |
| aromatic amino acid lyase | DWZ36_01840 | Not Available | Negative | 484927 - 486498 | 59140.6 |
| cysteine--trna ligase | DWZ36_01845 | Not Available | Negative | 486686 - 488167 | 56338.1 |
| arabinan endo-1,5-alpha-l-arabinosidase | DWZ36_01850 | Not Available | Negative | 488542 - 490425 | 70261.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

