Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialate o-acetylesterase | DWZ36_18600 | Not Available | Positive | 4370667 - 4372604 | 72504.6 |
| duf4249 domain-containing protein | DWZ36_18605 | Not Available | Negative | 4372636 - 4373667 | 39226.1 |
| tonb-dependent receptor | DWZ36_18610 | Not Available | Negative | 4373674 - 4376349 | 102190.0 |
| duf4974 domain-containing protein | DWZ36_18615 | Not Available | Negative | 4376357 - 4377247 | 33758.5 |
| hypothetical protein | DWZ36_18620 | Not Available | Negative | 4377274 - 4377681 | 15515.8 |
| rna polymerase sigma-70 factor | DWZ36_18625 | Not Available | Negative | 4377737 - 4378363 | 24869.6 |
| duf4249 domain-containing protein | DWZ36_18630 | Not Available | Negative | 4378416 - 4379402 | 38261.2 |
| tonb-dependent receptor | DWZ36_18635 | Not Available | Negative | 4379409 - 4380853 | 55822.5 |
| duf4468 domain-containing protein | DWZ36_18640 | Not Available | Negative | 4380873 - 4381979 | 40843.8 |
| ribose 5-phosphate isomerase b | DWZ36_18645 | Not Available | Negative | 4382086 - 4382520 | 15944.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

