Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family phosphatase | DWZ36_18490 | Not Available | Positive | 4341959 - 4342573 | 24060.7 |
| bifunctional riboflavin kinase/fad synthetase | DWZ36_18495 | Not Available | Positive | 4342573 - 4343493 | 35285.5 |
| duf3836 domain-containing protein | DWZ36_18505 | Not Available | Positive | 4343872 - 4344291 | 16015.9 |
| hypothetical protein | DWZ36_18510 | Not Available | Positive | 4344291 - 4344590 | 11054.1 |
| cpbp family intramembrane metalloprotease | DWZ36_18515 | Not Available | Positive | 4344763 - 4345593 | 30285.8 |
| duf2975 domain-containing protein | DWZ36_18520 | Not Available | Positive | 4345602 - 4346249 | 23980.7 |
| duf2975 domain-containing protein | DWZ36_18525 | Not Available | Positive | 4346266 - 4346913 | 24229.5 |
| hypothetical protein | DWZ36_18530 | Not Available | Positive | 4346924 - 4347181 | 10168.7 |
| transcriptional regulator | DWZ36_18535 | Not Available | Positive | 4347185 - 4347397 | 7789.65 |
| atp-dependent rna helicase | DWZ36_18540 | Not Available | Positive | 4347659 - 4349533 | 70716.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

