Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_18315 | Not Available | Negative | 4309783 - 4310991 | 46776.3 |
| plasmid mobilization relaxosome protein mobc | DWZ36_18335 | Not Available | Positive | 4312775 - 4313167 | 14997.3 |
| plasmid mobilization relaxosome protein mobc | DWZ36_18340 | Not Available | Positive | 4313164 - 4314111 | 35742.0 |
| arac family transcriptional regulator | DWZ36_18345 | Not Available | Negative | 4314133 - 4314792 | 25862.6 |
| arac family transcriptional regulator | DWZ36_18350 | Not Available | Negative | 4315052 - 4315951 | 35622.9 |
| mbl fold metallo-hydrolase | DWZ36_18355 | Not Available | Positive | 4316082 - 4316858 | 28663.6 |
| radical sam mobile pair protein a | DWZ36_18360 | Not Available | Positive | 4316855 - 4317523 | 26030.2 |
| radical sam mobile pair protein b | DWZ36_18365 | Not Available | Positive | 4317520 - 4318395 | 34028.9 |
| sensor histidine kinase | DWZ36_18370 | Not Available | Positive | 4318444 - 4318923 | 17607.1 |
| dna resolvase | DWZ36_18375 | Not Available | Negative | 4319162 - 4319800 | 23937.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

