Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_18265 | Not Available | Positive | 4295635 - 4296297 | 24838.4 |
| tonb-dependent receptor | DWZ36_18270 | Not Available | Positive | 4296311 - 4298467 | 81336.9 |
| cobaltochelatase subunit cobn | DWZ36_18275 | Not Available | Positive | 4298514 - 4302989 | 165969.0 |
| hypothetical protein | DWZ36_18280 | Not Available | Positive | 4302996 - 4303685 | 25151.1 |
| mota/tolq/exbb proton channel family protein | DWZ36_18285 | Not Available | Positive | 4303700 - 4304299 | 22102.6 |
| duf2149 domain-containing protein | DWZ36_18290 | Not Available | Positive | 4304301 - 4304630 | 12445.0 |
| duf4091 domain-containing protein | DWZ36_18295 | Not Available | Negative | 4304944 - 4306692 | 66396.3 |
| ahpc/tsa family protein | DWZ36_18300 | Not Available | Positive | 4306826 - 4307821 | 37139.8 |
| hypothetical protein | DWZ36_18305 | Not Available | Negative | 4307921 - 4308481 | 21343.8 |
| hypothetical protein | DWZ36_18310 | Not Available | Negative | 4308493 - 4309351 | 31547.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

