Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pcfk-like protein | DWZ36_18215 | Not Available | Negative | 4285775 - 4286185 | 15976.9 |
| hypothetical protein | DWZ36_18220 | Not Available | Negative | 4286203 - 4286799 | 23678.6 |
| hypothetical protein | DWZ36_18225 | Not Available | Negative | 4286811 - 4287035 | 9259.05 |
| hypothetical protein | DWZ36_18230 | Not Available | Negative | 4287048 - 4287275 | 7773.1 |
| ompa family protein | DWZ36_18235 | Not Available | Negative | 4288931 - 4290121 | 44997.5 |
| hypothetical protein | DWZ36_18240 | Not Available | Negative | 4290126 - 4292924 | 104563.0 |
| helix-turn-helix domain-containing protein | DWZ36_18245 | Not Available | Negative | 4293445 - 4294353 | 35494.1 |
| hypothetical protein | DWZ36_18250 | Not Available | Negative | 4294421 - 4294702 | 10793.6 |
| hypothetical protein | DWZ36_18255 | Not Available | Negative | 4294699 - 4294932 | 9045.06 |
| hypothetical protein | DWZ36_18260 | Not Available | Positive | 4295166 - 4295633 | 16027.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

