Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_18115 | Not Available | Positive | 4273130 - 4273789 | 23717.9 |
| ompa family protein | DWZ36_18120 | Not Available | Positive | 4273792 - 4274433 | 23821.2 |
| hypothetical protein | DWZ36_18125 | Not Available | Negative | 4274414 - 4274665 | 9503.3 |
| hypothetical protein | DWZ36_18130 | Not Available | Positive | 4275211 - 4275480 | 10425.4 |
| duf3791 domain-containing protein | DWZ36_18135 | Not Available | Positive | 4275552 - 4276001 | 17702.2 |
| duf3990 domain-containing protein | DWZ36_18140 | Not Available | Positive | 4275998 - 4276477 | 18186.0 |
| hypothetical protein | DWZ36_18145 | Not Available | Positive | 4276499 - 4276759 | 9998.22 |
| zeta toxin family protein | DWZ36_18150 | Not Available | Positive | 4276746 - 4277612 | 32860.7 |
| m23 family peptidase | DWZ36_18155 | Not Available | Negative | 4277659 - 4278324 | 25188.4 |
| duf4099 domain-containing protein | DWZ36_18160 | Not Available | Positive | 4278305 - 4279084 | 30087.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

