Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymyristoyl-acp dehydratase | DWZ36_01755 | Not Available | Negative | 469963 - 470343 | 14330.6 |
| hypothetical protein | DWZ36_01760 | Not Available | Negative | 470345 - 470887 | 20765.7 |
| aaa family atpase | DWZ36_01765 | Not Available | Negative | 470900 - 472474 | 60595.0 |
| outer membrane lipoprotein carrier protein lola | DWZ36_01770 | Not Available | Negative | 472637 - 473272 | 24738.2 |
| polysaccharide deacetylase family protein | DWZ36_01775 | Not Available | Negative | 474017 - 474709 | 26624.1 |
| kila-n domain-containing protein | DWZ36_01780 | Not Available | Negative | 474760 - 475614 | 33282.9 |
| 3-oxoacyl-acp synthase | DWZ36_01785 | Not Available | Negative | 475728 - 476681 | 35334.6 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | DWZ36_01790 | Not Available | Negative | 476685 - 477875 | 42120.2 |
| acyl carrier protein | DWZ36_01795 | Not Available | Negative | 477872 - 478129 | 9574.45 |
| beta-acp synthase | DWZ36_01800 | Not Available | Negative | 478135 - 479865 | 63692.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

