Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4133 domain-containing protein | DWZ36_18065 | Not Available | Positive | 4264076 - 4264375 | 11136.2 |
| conjugal transfer protein trag | DWZ36_18070 | Not Available | Positive | 4264381 - 4267221 | 110290.0 |
| plasmid transfer protein | DWZ36_18075 | Not Available | Positive | 4267232 - 4267906 | 25473.4 |
| hypothetical protein | DWZ36_18080 | Not Available | Positive | 4267908 - 4268564 | 25994.3 |
| plasmid transfer protein | DWZ36_18085 | Not Available | Positive | 4268557 - 4269579 | 37691.8 |
| conjugative transposon protein trak | DWZ36_18090 | Not Available | Positive | 4269612 - 4270226 | 23412.7 |
| hypothetical protein | DWZ36_18095 | Not Available | Positive | 4270226 - 4270657 | 16696.8 |
| conjugative transposon protein tram | DWZ36_18100 | Not Available | Positive | 4270661 - 4271770 | 41780.8 |
| conjugative transposon protein tran | DWZ36_18105 | Not Available | Positive | 4271772 - 4272611 | 32360.3 |
| hypothetical protein | DWZ36_18110 | Not Available | Positive | 4272624 - 4273127 | 19086.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

