Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate kinase | DWZ36_18010 | Not Available | Negative | 4251055 - 4252308 | 44034.9 |
| fecr family protein | DWZ36_18015 | Not Available | Positive | 4252532 - 4253458 | 35762.9 |
| susc/raga family tonb-linked outer membrane protein | DWZ36_18020 | Not Available | Positive | 4253610 - 4257026 | 125503.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DWZ36_18025 | Not Available | Positive | 4257045 - 4258658 | 60280.0 |
| dicarboxylate/amino acid:cation symporter | DWZ36_18030 | Not Available | Positive | 4258894 - 4260075 | 42249.4 |
| hypothetical protein | DWZ36_18040 | Not Available | Positive | 4261004 - 4261228 | 8381.53 |
| duf1738 domain-containing protein | DWZ36_18045 | Not Available | Negative | 4261225 - 4262235 | 39113.1 |
| recombinase family protein | DWZ36_18050 | Not Available | Negative | 4262660 - 4263253 | 22691.7 |
| hypothetical protein | DWZ36_18055 | Not Available | Positive | 4263399 - 4263740 | 13040.2 |
| duf4134 domain-containing protein | DWZ36_18060 | Not Available | Positive | 4263760 - 4264074 | 11030.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

