Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_17760 | Not Available | Negative | 4188046 - 4188810 | 30045.6 |
| hypothetical protein | DWZ36_17765 | Not Available | Negative | 4188815 - 4189129 | 11656.7 |
| hypothetical protein | DWZ36_17770 | Not Available | Negative | 4189138 - 4189467 | 13223.2 |
| hypothetical protein | DWZ36_17775 | Not Available | Positive | 4189668 - 4189907 | 9325.94 |
| hypothetical protein | DWZ36_17780 | Not Available | Negative | 4190130 - 4190543 | 15864.2 |
| toxin-antitoxin system protein | DWZ36_17785 | Not Available | Positive | 4190712 - 4190966 | 9636.27 |
| type ii toxin-antitoxin system yafq family toxin | DWZ36_17790 | Not Available | Positive | 4190963 - 4191232 | 10483.9 |
| hypothetical protein | DWZ36_17795 | Not Available | Negative | 4191377 - 4191613 | 8983.86 |
| recombinase | DWZ36_17800 | Not Available | Negative | 4191697 - 4192920 | 47390.1 |
| Trna-gly | Not Available | Not Available | Positive | 4193049 - 4193124 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

