Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_17710 | Not Available | Negative | 4178249 - 4179247 | 37421.1 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DWZ36_17715 | Not Available | Positive | 4179416 - 4180651 | 45637.2 |
| tetr/acrr family transcriptional regulator | DWZ36_17720 | Not Available | Positive | 4180654 - 4181376 | 27874.7 |
| hypothetical protein | DWZ36_17725 | Not Available | Negative | 4181465 - 4181899 | 16497.8 |
| para family protein | DWZ36_17730 | Not Available | Negative | 4181958 - 4182581 | 23398.3 |
| mobilization protein | DWZ36_17735 | Not Available | Negative | 4182598 - 4184160 | 60005.4 |
| hypothetical protein | DWZ36_17740 | Not Available | Negative | 4185031 - 4185261 | 8668.37 |
| phage antirepressor | DWZ36_17745 | Not Available | Negative | 4185384 - 4186253 | 32914.4 |
| hypothetical protein | DWZ36_17750 | Not Available | Negative | 4186508 - 4187068 | 21332.4 |
| hypothetical protein | DWZ36_17755 | Not Available | Negative | 4187095 - 4188021 | 35093.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

