Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_17655 | Not Available | Positive | 4167948 - 4168163 | 8033.03 |
| amidoligase enzyme | DWZ36_17660 | Not Available | Positive | 4168374 - 4169321 | 36149.4 |
| hypothetical protein | DWZ36_17665 | Not Available | Positive | 4169327 - 4169563 | 8989.6 |
| hypothetical protein | DWZ36_17670 | Not Available | Negative | 4169686 - 4169937 | 9205.81 |
| is21 family transposase | DWZ36_17675 | Not Available | Positive | 4170098 - 4171618 | 59727.3 |
| aaa family atpase | DWZ36_17680 | Not Available | Positive | 4171629 - 4172402 | 29628.1 |
| xre family transcriptional regulator | DWZ36_17690 | Not Available | Positive | 4173733 - 4174119 | 14707.7 |
| hypothetical protein | DWZ36_17695 | Not Available | Negative | 4174554 - 4174949 | 14967.8 |
| hypothetical protein | DWZ36_17700 | Not Available | Negative | 4175026 - 4176705 | 63365.5 |
| hypothetical protein | DWZ36_17705 | Not Available | Negative | 4176715 - 4178037 | 49429.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

