Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_01700 | Not Available | Negative | 453298 - 454119 | 30751.9 |
| hypothetical protein | DWZ36_01710 | Not Available | Negative | 456859 - 457434 | 21488.1 |
| phenylacetate--coa ligase family protein | DWZ36_01715 | Not Available | Negative | 457485 - 458780 | 49505.5 |
| choloylglycine hydrolase | DWZ36_01720 | Not Available | Negative | 458782 - 460446 | 63163.4 |
| nad(p)/fad-dependent oxidoreductase | DWZ36_01725 | Not Available | Negative | 460439 - 461929 | 56616.9 |
| methyltransferase domain-containing protein | DWZ36_01730 | Not Available | Negative | 461922 - 465776 | 146389.0 |
| duf2062 domain-containing protein | DWZ36_01735 | Not Available | Negative | 465769 - 466962 | 44810.8 |
| duf4221 domain-containing protein | DWZ36_01740 | Not Available | Negative | 467084 - 468268 | 46153.2 |
| duf4221 domain-containing protein | DWZ36_01745 | Not Available | Negative | 468322 - 469497 | 45809.6 |
| hypothetical protein | DWZ36_01750 | Not Available | Negative | 469570 - 469854 | 9654.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

