Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobilization protein | DWZ36_17500 | Not Available | Negative | 4131094 - 4132170 | 40903.1 |
| duf3853 family protein | DWZ36_17505 | Not Available | Negative | 4132185 - 4132493 | 11200.8 |
| hypothetical protein | DWZ36_17510 | Not Available | Negative | 4132716 - 4133735 | 40601.0 |
| duf1016 family protein | DWZ36_17515 | Not Available | Negative | 4133746 - 4135038 | 49179.9 |
| site-specific integrase | DWZ36_17520 | Not Available | Negative | 4135105 - 4136388 | 50553.4 |
| dna polymerase iii subunit gamma/tau | DWZ36_17525 | Not Available | Negative | 4136923 - 4138734 | 67542.9 |
| septum formation initiator family protein | DWZ36_17530 | Not Available | Positive | 4138853 - 4139149 | 11872.4 |
| hypothetical protein | DWZ36_17535 | Not Available | Positive | 4139173 - 4139490 | 12033.2 |
| s46 family peptidase | DWZ36_17540 | Not Available | Negative | 4139608 - 4141794 | 82684.6 |
| s46 family peptidase | DWZ36_17545 | Not Available | Negative | 4141794 - 4143959 | 81216.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

