Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_17245 | Not Available | Negative | 4074213 - 4075520 | 51135.9 |
| glycosyltransferase family 2 protein | DWZ36_17250 | Not Available | Negative | 4075527 - 4076417 | 35207.6 |
| lipopolysaccharide biosynthesis protein | DWZ36_17255 | Not Available | Negative | 4076445 - 4078007 | 59245.1 |
| hypothetical protein | DWZ36_17260 | Not Available | Positive | 4078332 - 4078580 | 9417.51 |
| hypothetical protein | DWZ36_17265 | Not Available | Negative | 4078713 - 4079096 | 14813.0 |
| upxy family transcription antiterminator | DWZ36_17270 | Not Available | Negative | 4079177 - 4079725 | 21158.1 |
| duf2442 domain-containing protein | DWZ36_17280 | Not Available | Negative | 4080720 - 4081136 | 16026.2 |
| duf3791 domain-containing protein | DWZ36_17285 | Not Available | Positive | 4081447 - 4081875 | 15954.4 |
| duf3990 domain-containing protein | DWZ36_17290 | Not Available | Positive | 4081872 - 4082345 | 18414.9 |
| hypothetical protein | DWZ36_17295 | Not Available | Positive | 4082342 - 4082569 | 8602.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

