Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroneopterin aldolase | DWZ36_17195 | Not Available | Positive | 4064571 - 4064939 | 13959.8 |
| radical sam protein | DWZ36_17200 | Not Available | Negative | 4065086 - 4065967 | 33160.9 |
| glycosyltransferase family 2 protein | DWZ36_17205 | Not Available | Negative | 4066055 - 4067080 | 39378.6 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | DWZ36_17210 | Not Available | Negative | 4067116 - 4068432 | 49152.8 |
| long-chain fatty acid--coa ligase | DWZ36_17215 | Not Available | Positive | 4068538 - 4070211 | 63271.5 |
| hypothetical protein | DWZ36_17220 | Not Available | Positive | 4070372 - 4070572 | 6663.71 |
| hypothetical protein | DWZ36_17225 | Not Available | Positive | 4070727 - 4071395 | 25980.0 |
| glycosyltransferase | DWZ36_17230 | Not Available | Negative | 4071539 - 4072573 | 40784.6 |
| acyltransferase | DWZ36_17235 | Not Available | Negative | 4072554 - 4073288 | 27614.8 |
| alpha-1,2-fucosyltransferase | DWZ36_17240 | Not Available | Negative | 4073367 - 4074194 | 33097.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

