Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | DWZ36_17090 | Not Available | Negative | 4040499 - 4040906 | 15657.8 |
| pp_03353 | DWZ36_17095 | Not Available | Positive | 4040965 - 4041882 | Not Available |
| atp-binding protein | DWZ36_17100 | Not Available | Negative | 4042689 - 4044047 | 52846.8 |
| hypothetical protein | DWZ36_17105 | Not Available | Positive | 4044300 - 4044557 | 10165.3 |
| hypothetical protein | DWZ36_17110 | Not Available | Negative | 4044699 - 4046366 | 64758.9 |
| alpha/beta hydrolase | DWZ36_17115 | Not Available | Positive | 4046632 - 4047501 | 32917.6 |
| hypothetical protein | DWZ36_17120 | Not Available | Positive | 4047866 - 4048153 | 10650.2 |
| sugar o-acetyltransferase | DWZ36_17125 | Not Available | Positive | 4048168 - 4048743 | 20876.8 |
| hypothetical protein | DWZ36_17130 | Not Available | Negative | 4048765 - 4048944 | 6355.62 |
| hypothetical protein | DWZ36_17135 | Not Available | Negative | 4048941 - 4049192 | 9364.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

