Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatase pap2 family protein | DWZ36_17030 | Not Available | Negative | 4027772 - 4028383 | 22003.9 |
| succinate dehydrogenase/fumarate reductase cytochrome b subunit | DWZ36_17035 | Not Available | Positive | 4028574 - 4029260 | 25487.5 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | DWZ36_17040 | Not Available | Positive | 4029295 - 4031253 | 72651.5 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | DWZ36_17045 | Not Available | Positive | 4031274 - 4032029 | 27308.1 |
| arac family transcriptional regulator | DWZ36_17050 | Not Available | Negative | 4032094 - 4032954 | 33227.9 |
| fimbrillin family protein | DWZ36_17060 | Not Available | Negative | 4033461 - 4034450 | 35806.3 |
| duf5119 domain-containing protein | DWZ36_17065 | Not Available | Negative | 4034499 - 4035494 | 36296.9 |
| duf3575 domain-containing protein | DWZ36_17070 | Not Available | Negative | 4035461 - 4036828 | 52080.2 |
| glycoside hydrolase family 29 | DWZ36_17080 | Not Available | Positive | 4037423 - 4039306 | 70662.0 |
| dna-protecting protein dpra | DWZ36_17085 | Not Available | Negative | 4039387 - 4040502 | 40940.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

