Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DWZ36_16980 | Not Available | Positive | 4013295 - 4013789 | 19177.3 |
| hypothetical protein | DWZ36_16985 | Not Available | Positive | 4013834 - 4016761 | 106643.0 |
| hypothetical protein | DWZ36_16990 | Not Available | Positive | 4016850 - 4017371 | 19971.1 |
| tonb-dependent receptor | DWZ36_16995 | Not Available | Positive | 4017696 - 4020464 | 104197.0 |
| acid phosphatase | DWZ36_17000 | Not Available | Positive | 4020475 - 4021446 | 37239.9 |
| sodium:calcium antiporter | DWZ36_17005 | Not Available | Positive | 4021510 - 4022472 | 33528.8 |
| n-acetyltransferase | DWZ36_17010 | Not Available | Positive | 4022547 - 4023683 | 43814.1 |
| type iia dna topoisomerase subunit b | DWZ36_17015 | Not Available | Positive | 4023714 - 4025591 | 70989.7 |
| phosphopantetheine adenylyltransferase | DWZ36_17020 | Not Available | Positive | 4025609 - 4026064 | 17350.0 |
| s41 family peptidase | DWZ36_17025 | Not Available | Positive | 4026067 - 4027668 | 60797.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

