Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hit family protein | DWZ36_16765 | Not Available | Negative | 3962815 - 3963240 | 16329.5 |
| sodium:proton antiporter | DWZ36_16770 | Not Available | Negative | 3963265 - 3965532 | 84385.5 |
| glycine cleavage system aminomethyltransferase gcvt | DWZ36_16775 | Not Available | Negative | 3965738 - 3966823 | 39665.6 |
| peptidase t | DWZ36_16780 | Not Available | Negative | 3966859 - 3968079 | 45287.2 |
| amidophosphoribosyltransferase | DWZ36_16785 | Not Available | Negative | 3968187 - 3969593 | 51992.8 |
| fluoride efflux transporter crcb | DWZ36_16790 | Not Available | Positive | 3969692 - 3970057 | 13272.6 |
| hypothetical protein | DWZ36_16795 | Not Available | Negative | 3970131 - 3970886 | 28172.2 |
| hybrid sensor histidine kinase/response regulator | DWZ36_16800 | Not Available | Positive | 3971183 - 3975172 | 152171.0 |
| pap2 family protein | DWZ36_16805 | Not Available | Positive | 3975279 - 3975896 | 23044.7 |
| 9-o-acetylesterase | DWZ36_16810 | Not Available | Positive | 3975934 - 3977850 | 72647.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

