Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_16665 | Not Available | Positive | 3944347 - 3945018 | 25628.6 |
| duf4857 domain-containing protein | DWZ36_16670 | Not Available | Positive | 3945051 - 3946079 | 39445.4 |
| twin-arginine translocase subunit tatc | DWZ36_16675 | Not Available | Negative | 3946622 - 3947452 | 32372.7 |
| twin-arginine translocase tata/tate family subunit | DWZ36_16680 | Not Available | Negative | 3947459 - 3947662 | 7276.18 |
| ecf transporter s component | DWZ36_16685 | Not Available | Negative | 3947810 - 3948319 | 18481.4 |
| hypothetical protein | DWZ36_16690 | Not Available | Positive | 3948452 - 3948934 | 17560.8 |
| duf4010 domain-containing protein | DWZ36_16695 | Not Available | Positive | 3949012 - 3950301 | 48232.9 |
| putative sulfate exporter family transporter | DWZ36_16700 | Not Available | Negative | 3950393 - 3951379 | 35064.0 |
| lysr family transcriptional regulator | DWZ36_16705 | Not Available | Negative | 3951468 - 3952364 | 34399.8 |
| hypothetical protein | DWZ36_16710 | Not Available | Negative | 3952377 - 3952958 | 21484.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

