Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DWZ36_16615 | Not Available | Negative | 3933590 - 3934765 | 42775.8 |
| tlpa family protein disulfide reductase | DWZ36_16620 | Not Available | Positive | 3934825 - 3935346 | 19785.8 |
| hypothetical protein | DWZ36_16625 | Not Available | Negative | 3935480 - 3935842 | 13994.2 |
| hypothetical protein | DWZ36_16630 | Not Available | Negative | 3935942 - 3936229 | 11067.8 |
| tonb-dependent receptor | DWZ36_16635 | Not Available | Positive | 3936684 - 3939419 | 103889.0 |
| duf4876 domain-containing protein | DWZ36_16640 | Not Available | Positive | 3939441 - 3940655 | 44704.4 |
| hypothetical protein | DWZ36_16645 | Not Available | Positive | 3940670 - 3942244 | 58446.7 |
| hypothetical protein | DWZ36_16650 | Not Available | Positive | 3942265 - 3942849 | 20951.8 |
| peptidase | DWZ36_16655 | Not Available | Positive | 3942833 - 3943408 | 21635.8 |
| abc transporter atp-binding protein | DWZ36_16660 | Not Available | Positive | 3943436 - 3944323 | 33841.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

