Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_16455 | Not Available | Positive | 3907727 - 3908212 | 18783.2 |
| hypothetical protein | DWZ36_16460 | Not Available | Positive | 3908270 - 3910069 | 70276.3 |
| hypothetical protein | DWZ36_16465 | Not Available | Positive | 3910480 - 3910839 | 14036.7 |
| hypothetical protein | DWZ36_16470 | Not Available | Positive | 3910839 - 3911345 | 20024.8 |
| hypothetical protein | DWZ36_16475 | Not Available | Positive | 3911680 - 3911883 | 8101.99 |
| winged helix-turn-helix transcriptional regulator | DWZ36_16480 | Not Available | Positive | 3911846 - 3912487 | 24993.2 |
| duf3871 family protein | DWZ36_16490 | Not Available | Positive | 3913065 - 3913990 | 34919.7 |
| ph domain-containing protein | DWZ36_16495 | Not Available | Negative | 3914242 - 3914685 | 16664.8 |
| hypothetical protein | DWZ36_16500 | Not Available | Negative | 3914854 - 3915288 | 16911.9 |
| crp/fnr family transcriptional regulator | DWZ36_16510 | Not Available | Positive | 3915818 - 3916381 | 22255.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

