Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWZ36_16405 | Not Available | Positive | 3898438 - 3898560 | 4317.09 |
| hypothetical protein | DWZ36_16410 | Not Available | Positive | 3898505 - 3898684 | 6853.27 |
| hypothetical protein | DWZ36_16415 | Not Available | Negative | 3898837 - 3899592 | 27628.8 |
| hypothetical protein | DWZ36_16420 | Not Available | Positive | 3899940 - 3900554 | 23057.4 |
| sodium:glutamate symporter | DWZ36_16425 | Not Available | Positive | 3900769 - 3902148 | 49829.2 |
| duf4375 domain-containing protein | DWZ36_16430 | Not Available | Negative | 3902318 - 3902827 | 19574.0 |
| hypothetical protein | DWZ36_16435 | Not Available | Positive | 3903064 - 3903765 | 25285.6 |
| gggtgrt protein | DWZ36_16440 | Not Available | Positive | 3903784 - 3904794 | 35757.9 |
| site-specific integrase | DWZ36_16445 | Not Available | Positive | 3905139 - 3906356 | 46712.0 |
| hypothetical protein | DWZ36_16450 | Not Available | Positive | 3906446 - 3907402 | 36856.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

