Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase family protein | DWZ36_16355 | Not Available | Positive | 3885927 - 3886772 | 32119.8 |
| methionine synthase | DWZ36_16360 | Not Available | Negative | 3886968 - 3889721 | 100876.0 |
| ssra-binding protein | DWZ36_16365 | Not Available | Negative | 3889759 - 3890211 | 17572.4 |
| duf1282 domain-containing protein | DWZ36_16370 | Not Available | Negative | 3890211 - 3890780 | 21095.2 |
| recombinase | DWZ36_16375 | Not Available | Positive | 3891155 - 3892243 | 41866.2 |
| hypothetical protein | DWZ36_16380 | Not Available | Positive | 3892636 - 3892974 | 13051.2 |
| duf5119 domain-containing protein | DWZ36_16385 | Not Available | Positive | 3892971 - 3893978 | 37815.5 |
| fimbrillin family protein | DWZ36_16390 | Not Available | Positive | 3894022 - 3895161 | 42246.0 |
| fimbrillin family protein | DWZ36_16395 | Not Available | Positive | 3895291 - 3896361 | 39483.0 |
| hypothetical protein | DWZ36_16400 | Not Available | Positive | 3896427 - 3898133 | 63815.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

