Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF31-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484022 bp
Thymine Count
1483399 bp
Guanine Count
1069820 bp
Cytosine Count
1074558 bp
Genome Length
5112322 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel family protein | DWZ36_16025 | Not Available | Negative | 3802220 - 3803053 | 30665.8 |
| threonylcarbamoyl-amp synthase | DWZ36_16030 | Not Available | Negative | 3803102 - 3803716 | 23133.3 |
| tetratricopeptide repeat protein | DWZ36_16035 | Not Available | Negative | 3803723 - 3805723 | 76833.1 |
| spfh domain-containing protein | DWZ36_16045 | Not Available | Positive | 3806295 - 3807245 | 35395.3 |
| arc family dna-binding protein | DWZ36_16050 | Not Available | Positive | 3807254 - 3807448 | 7483.19 |
| Trna-ile | Not Available | Not Available | Positive | 3810445 - 3810521 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 3810536 - 3810609 | Not Available |
| alpha-rhamnosidase | DWZ36_16080 | Not Available | Negative | 3814026 - 3816170 | 82024.7 |
| right-handed parallel beta-helix repeat-containing protein | DWZ36_16085 | Not Available | Negative | 3816185 - 3818008 | 68576.0 |
| glycoside hydrolase family 127 protein | DWZ36_16090 | Not Available | Negative | 3818033 - 3820138 | 78773.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

